visual.conf 1.2 KB

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  1. # -*- Mode: Text; tab-width: 8; indent-tabs-mode: nil; coding: utf-8; -*-
  2. # vim:set ft=conf ts=2 sw=2 sts=2 autoindent: noet
  3. [labels]
  4. ### Entity types
  5. Gene | Gene | Gn | G
  6. Entity | Entity | Ent | En | E
  7. Increase | Increase | Incr
  8. Decrease | Decrease | Decr
  9. ### Event types
  10. GeneExpression | Gene expression | Expression | Expr
  11. TranscriptionOfGene | Transcription | Trns
  12. GeneticModification | Genetic modification | G. modification | G.mod
  13. RegulationOfGeneExpression | Regulation | Reg
  14. PositiveRegulationOfGeneExpression | Positive regulation | +Regulation | +Reg
  15. NegativeRegulationOfGeneExpression | Negative regulation | -Regulation | -Reg
  16. ### Relation types
  17. Equiv | Equiv | Eq
  18. ### Role types
  19. Theme | Theme | Th
  20. Cause | Cause | Ca
  21. [drawing]
  22. SPAN_DEFAULT fgColor:black, bgColor:lightgreen, borderColor:darken
  23. ARC_DEFAULT color:black, dashArray:-
  24. ATTRIBUTE_DEFAULT glyph:*
  25. #Protein bgColor:deepskyblue
  26. #Entity bgColor:lightskyblue
  27. Equiv dashArray:3-3
  28. Gene bgColor:#7fa2ff
  29. PositiveRegulationOfGeneExpression bgColor:#e0ff00
  30. RegulationOfGeneExpression bgColor:#ffff00
  31. NegativeRegulationOfGeneExpression bgColor:#ffe000
  32. # BioNLP ST event participant roles
  33. Cause color:#007700