annotation.conf 2.4 KB

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  1. [entities]
  2. !Anatomical_entity
  3. !Anatomical_structure
  4. Organism_subdivision
  5. Anatomical_system
  6. Organ
  7. Multi-tissue_structure
  8. Tissue
  9. Cell
  10. Developing_anatomical_structure
  11. Cellular_component
  12. Organism_substance
  13. Immaterial_anatomical_entity
  14. Pathological_formation
  15. Cancer
  16. [relations]
  17. # fragment (discontinuous span)
  18. frag Arg1:Organism_subdivision, Arg2:Organism_subdivision
  19. frag Arg1:Anatomical_system, Arg2:Anatomical_system
  20. frag Arg1:Organ, Arg2:Organ
  21. frag Arg1:Multi-tissue_structure, Arg2:Multi-tissue_structure
  22. frag Arg1:Tissue, Arg2:Tissue
  23. frag Arg1:Cell, Arg2:Cell
  24. frag Arg1:Developing_anatomical_structure, Arg2:Developing_anatomical_structure
  25. frag Arg1:Cellular_component, Arg2:Cellular_component
  26. frag Arg1:Organism_substance, Arg2:Organism_substance
  27. frag Arg1:Immaterial_anatomical_entity, Arg2:Immaterial_anatomical_entity
  28. frag Arg1:Pathological_formation, Arg2:Pathological_formation
  29. frag Arg1:Cancer, Arg2:Cancer
  30. # part-of (note: should be more constrained)
  31. Part-of Arg1:<ENTITY>, Arg2:<ENTITY>
  32. # equivalence (abbreviations and local aliases)
  33. Equiv Arg1:Organism_subdivision, Arg2:Organism_subdivision, <REL-TYPE>:symmetric-transitive
  34. Equiv Arg1:Anatomical_system, Arg2:Anatomical_system, <REL-TYPE>:symmetric-transitive
  35. Equiv Arg1:Organ, Arg2:Organ, <REL-TYPE>:symmetric-transitive
  36. Equiv Arg1:Multi-tissue_structure, Arg2:Multi-tissue_structure, <REL-TYPE>:symmetric-transitive
  37. Equiv Arg1:Tissue, Arg2:Tissue, <REL-TYPE>:symmetric-transitive
  38. Equiv Arg1:Cell, Arg2:Cell, <REL-TYPE>:symmetric-transitive
  39. Equiv Arg1:Developing_anatomical_structure, Arg2:Developing_anatomical_structure, <REL-TYPE>:symmetric-transitive
  40. Equiv Arg1:Cellular_component, Arg2:Cellular_component, <REL-TYPE>:symmetric-transitive
  41. Equiv Arg1:Organism_substance, Arg2:Organism_substance, <REL-TYPE>:symmetric-transitive
  42. Equiv Arg1:Immaterial_anatomical_entity, Arg2:Immaterial_anatomical_entity, <REL-TYPE>:symmetric-transitive
  43. Equiv Arg1:Pathological_formation, Arg2:Pathological_formation, <REL-TYPE>:symmetric-transitive
  44. Equiv Arg1:Cancer, Arg2:Cancer, <REL-TYPE>:symmetric-transitive
  45. [attributes]
  46. # all binary flags
  47. Processed Arg:<ENTITY>
  48. Plant Arg:<ENTITY>
  49. Pathological Arg:<ENTITY>
  50. Developing Arg:<ENTITY>
  51. [events]
  52. # none defined.