# -*- Mode: Text; tab-width: 8; indent-tabs-mode: nil; coding: utf-8; -*- # vim:set ft=conf ts=2 sw=2 sts=2 autoindent: [labels] ### Entity labels Protein | Protein | Pro | Pr | P Entity | Entity | Ent | En | E Complex Drug Simple_molecule | Simple molecule | Smpl mol ### Relation labels Equiv | Equiv | Eq ### Event labels Gene_expression | Gene expression | Expression | Expr Transcription | Transcription | Trns Protein_catabolism | Protein catabolism | Catabolism | Catab Localization | Localization | Locl Binding | Binding | Bind Phosphorylation | Phosphorylation | Phos Dephosphorylation | Dephosphorylation | -Phos Ubiquitination | Ubiquitination | Ubiq Deubiquitination | Deubiquitination | -Ubiq Regulation | Regulation | Reg Positive_regulation | Positive regulation | +Regulation | +Reg Negative_regulation | Negative regulation | -Regulation | -Reg ### Role labels Theme | Theme | Th Cause | Cause | Ca Site | Site | Si CSite | CSite | CSi Product | Prod [drawing] ### Defaults SPAN_DEFAULT fgColor:black, bgColor:lightgreen, borderColor:darken ARC_DEFAULT color:black, dashArray:-, arrowHead:triangle-5 ATTRIBUTE_DEFAULT glyph:* ### Entity drawing Protein bgColor:#7fa2ff Entity bgColor:#b4c8ff Simple_molecule bgColor:#8fcfff ### Event drawing Regulation bgColor:#ffff00 Positive_regulation bgColor:#e0ff00 Catalysis bgColor:#e0ff00 Negative_regulation bgColor:#ffe000 Dephosphorylation bgColor:#18c59a Deubiquitination bgColor:#18c59a Dissociation bgColor:#18c59a ### Arc drawing Equiv dashArray:3-3, arrowHead:none Cause color:#007700 Site color:#0000aa CSite color:#0000aa ToLoc color:#0000cc AtLoc color:#0000cc Product color:#000077 # Attributes Negation box:crossed, glyph:, dashArray: Speculation dashArray:3-3, glyph: